Publications

Acknowledgements for iVEC in the scholarly literature – updated bibliography

2015

Deeks, James and Lumley, David. 2015. “Seismic prism waves generated by seafloor canyons and their effects on subsurface imaging.” ASEG Extended Abstracts. 1-4. http://www.publish.csiro.au/?act=view_file&file_id=ASEG2015ab015.pdf

Thapa, J., Zhao, M., Cheng, L. and Zhou, T. 2015. “Three-dimensional simulations of flow past two circular cylinders in side-by-side arrangements at right and oblique attacks.” Journal of Fluids and Structures. doi: 10.1016. http://www.sciencedirect.com/science/article/pii/S0889974615000444

Thatcher, Marcus, John McGregor, Martin Dix, and Jack Katzfey. 2015. “A New Approach for Coupled Regional Climate Modeling Using More than 10,000 Cores.” Environmental Software Systems. Infrastructures, Services and Applications: 599-607. doi: 10.1007/978-3-319-15994-2_61. http://link.springer.com/chapter/10.1007/978-3-319-15994-2_61

Zhu, X.J., L. Wen, G. Hobbs, Y. Zhang, Y. Wang, D.R. Madison, R.N. Manchester, M. Kerr, P.A. Rosado, and J.-B. Wang. 2015. “Detection and localization of single-source gravitational waves with pulsar timing arrays.” Monthly Notices of the Royal Astronomical Society: 000, 1-17. http://arxiv.org/pdf/1502.06001.pdf

2014

Al Safar, Habiba S., Heather J. Cordell, Osman Jafer, Denise Anderson, Sarra E. Jamieson, Michaela Fakiola, Kamal Khazanehdari, Guan K. Tay, and Jenefer M. Blackwell. 2013. “A Genome-Wide Search for Type 2 Diabetes Susceptibility Genes in an Extended Arab Family.” Annals of Human Genetics 77 (6): 488-503. doi: 10.1111/ahg.12036. http://onlinelibrary.wiley.com/doi/10.1111/ahg.12036/full

Barrero, Roberto A, Paula Moolhuijzen, Léa Indjein, Bronwyn Venus, Gabriel Keeble-Gagnère, John Power, Matthew I Bellgard, and Ala E Lew-Tabor. 2014. “Draft Genome Sequences of Campylobacter Fetus Subsp. Venerealis Bv. Venerealis Strain B6 and Bv. Intermedius Strain 642-21.” Genome announcements 2 (5): e00943-14. http://genomea.asm.org/content/2/5/e00943-14.full.pdf

Bruno, M., F. R. Massaro, M. Prencipe, R. Demichelis, M. De La Pierre, and F. Nestola. 2014. “Ab Initio Calculations of the Main Crystal Surfaces of Forsterite (Mg2sio4): A Preliminary Study to Understand the Nature of Geochemical Processes at the Olivine Interface.” The Journal of Physical Chemistry C118 (5): 2498-2506. doi: 10.1021/jp409837d. http://pubs.acs.org/doi/abs/10.1021/jp409837d

Carter, Damien J, and Andrew L Rohl. 2014. “Van Der Waals Corrected Density Functional Calculations of the Adsorption of Benzene on the Cu (111) Surface.” Journal of computational chemistry. http://onlinelibrary.wiley.com/doi/10.1002/jcc.23745/full

Christie, H. J., M. Robinson, D. L. Roach, D. K. Ross, I. Suarez-Martinez, and N. A. Marks. “Simulating Radiation Damage Cascades in Graphite.” Carbon (0). doi: http://dx.doi.org/10.1016/j.carbon.2014.09.031.

Douglas, G. B., M. G. Trefry, J. T. Wylie, P. G. Wilkes, G. J. Puzon, and A. H. Kaksonen. 2015. “Potential Biogeochemical Impacts of Heat Rejection in the Mullaloo Aquifer, Western Australia.” Geothermics 53 (0): 429-445. doi: http://dx.doi.org/10.1016/j.geothermics.2014.08.004.

Evans, Bradley John. “Monitoring and Modelling Forest and Woodland Declines under a Drying Climate, from Individual Tree Canopies to Landscapes, across the Southwest of Western Australia.” Murdoch University. http://researchrepository.murdoch.edu.au/20553/2/02Whole.pdf

Ghesquière, Pierre, Dahbia Talbi, and Amir Karton. 2014. “The Reaction of the Benzene Cation with Acetylenes for the Growth of Pahs in the Interstellar Medium.” Chemical Physics Letters 595–596 (0): 13-19. doi: http://dx.doi.org/10.1016/j.cplett.2014.01.040.

Heberling, Frank, Victor L. Vinograd, Robert Polly, Julian D. Gale, Stephanie Heck, Jörg Rothe, Dirk Bosbach, Horst Geckeis, and Björn Winkler. “A Thermodynamic Adsorption/Entrapment Model for Selenium(Iv) Coprecipitation with Calcite.” Geochimica et Cosmochimica Acta (0). doi:http://dx.doi.org/10.1016/j.gca.2014.02.044.

Hemani, Gibran, Konstantin Shakhbazov, Harm-Jan Westra, Tonu Esko, Anjali K Henders, Allan F McRae, Jian Yang, Greg Gibson, Nicholas G Martin, and Andres Metspalu. 2014. “Detection and Replication of Epistasis Influencing Transcription in Humans.” Nature. http://www.nature.com/nature/journal/vaop/ncurrent/full/nature13005.html

Hirt, Christian, Sten Claessens, Thomas Fecher, Michael Kuhn, Roland Pail, and Moritz Rexer. 2013. “New Ultrahigh-Resolution Picture of Earth’s Gravity Field.” Geophysical Research Letters 40 (16): 4279-4283. doi: 10.1002/grl.50838. http://onlinelibrary.wiley.com/doi/10.1002/grl.50838/full

Hirt, Christian, and Michael Kuhn. 2014. “Band-Limited Topographic Mass Distribution Generates Full-Spectrum Gravity Field – Gravity Forward Modelling in the Spectral and Spatial Domains Revisited.” Journal of Geophysical Research: Solid Earth: 2013JB010900. doi: 10.1002/2013JB010900. http://onlinelibrary.wiley.com/doi/10.1002/2013JB010900/abstract

Hirt, Christian, Michael Kuhn, Sten Claessens, Roland Pail, Kurt Seitz, and Thomas Gruber. 2014. “Study of the Earth’s Short-Scale Gravity Field Using the Ertm2160 Gravity Model.” Computers & Geosciences. http://www.sciencedirect.com/science/article/pii/S0098300414002039

Horner, Jonathan, Robert Wittenmyer, Tobias Hinse, Jonathan Marshall, and Alex Mustill. 2014. “Wobbling Ancient Binaries-Here Be Planets?” arXiv preprint arXiv:1401.6742. http://arxiv.org/abs/1401.6742

Horner, Jonathan, Robert A Wittenmyer, Tobias C Hinse, and Jonathan P Marshall. 2014. “A Dynamical Investigation of the Proposed Bd+ 20 2457 System.” arXiv preprint arXiv:1401.2793. http://arxiv.org/abs/1401.2793

Izaac, Josh A., and Jingbo B. Wang. “Pyctqw: A Continuous-Time Quantum Walk Simulator on Distributed Memory Computers.” Computer Physics Communications (0). doi: http://dx.doi.org/10.1016/j.cpc.2014.09.011.

Jensen, S., S. Samanta, S. Chakrabarti-Bell, K. Regenauer-Lieb, K. H. M. Siddique, and S. Wang. 2014. “Automated Thresholding and Analysis of Microct Scanned Bread Dough.” Journal of Microscopy 256 (2): 100-110. doi: 10.1111/jmi.12163. http://onlinelibrary.wiley.com/doi/10.1111/jmi.12163/full

Karton, Amir. 2014. “Inversion and Rotation Processes Involving Non-Planar Aromatic Compounds Catalyzed by Extended Polycyclic Aromatic Hydrocarbons.” Chemical Physics Letters 614 (0): 156-161. doi: http://dx.doi.org/10.1016/j.cplett.2014.09.032.

Liu, J., K. Regenauer-Lieb, R. Freij-Ayoub, B. Clennell, and G. Pereira. “Carbonate Characterization, Property Simulation and Upscaling Using Microtomography.” In 13th International Congress of the Brazilian Geophysical Society &Amp; Expogef, Rio De Janeiro, Brazil, 26–29 August 2013, 921-925. http://library.seg.org/doi/abs/10.1190/sbgf2013-189

Lorenzen, Sonja, Banaz Omar, Mark C. Zammit, Dmitry V. Fursa, and Igor Bray. 2014. “Plasma Pressure Broadening for Few-Electron Emitters Including Strong Electron Collisions within a Quantum-Statistical Theory.” Physical Review E 89 (2): 023106. http://link.aps.org/doi/10.1103/PhysRevE.89.023106.

Lyons, Albert J., Neha S. Gandhi, and Ricardo L. Mancera. 2014. “Molecular Dynamics Simulation of the Phosphorylation-Induced Conformational Changes of a Tau Peptide Fragment.” Proteins: Structure, Function, and Bioinformatics: n/a-n/a. doi: 10.1002/prot.24544. http://onlinelibrary.wiley.com/doi/10.1002/prot.24544/full

Mahbub, M. Selim, Waseem Kamleh, Derek B. Leinweber, and Anthony G. Williams. 2014. “Searching for Low-Lying Multi-Particle Thresholds in Lattice Spectroscopy.” Annals of Physics 342 (0): 270-282. doi: http://dx.doi.org/10.1016/j.aop.2014.01.004.

Mei, Yuan, David M. Sherman, Weihua Liu, Barbara Etschmann, Denis Testemale, and Joël Brugger. “Zinc Complexation in Chloride-Rich Hydrothermal Fluids (25–600 °C): A Thermodynamic Model Derived from Ab Initio Molecular Dynamics.” Geochimica et Cosmochimica Acta (0). doi: http://dx.doi.org/10.1016/j.gca.2014.09.023.

Nasr-Azadani, MM, and E Meiburg. 2013. “Turbidity Currents Interacting with Three-Dimensional Seafloor Topography.” J Fluid Mech (submitted). http://www.engineering.ucsb.edu/~mmnasr/NasrAzadani_Meiburg_2014_JFM.pdf

Ottochian, Alistar, Guilhem Dezanneau, Clement Gilles, Paolo Raiteri, Chris Knight, and Julian D. Gale. 2014. “Influence of Isotropic and Biaxial Strain on Proton Conduction in Y-Doped Bazro3: A Reactive Molecular Dynamics Study.” Journal of Materials Chemistry A 2 (9): 3127-3133. doi: 10.1039/C3TA12800H. http://pubs.rsc.org/en/content/articlehtml/2014/ta/c3ta12800h

Panigrahi, Rashmi, Abdussalam Adina-Zada, James Whelan, and Alice Vrielink. 2013. “Ligand Recognition by the Tpr Domain of the Import Factor Toc64 from Arabidopsis Thaliana.” PloS one 8 (12): e83461. http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0083461#pone-0083461-g010

Potter, TM, L Staveley-Smith, B Reville, C-Y Ng, GV Bicknell, RS Sutherland, and AY Wagner. 2014. “Multi-Dimensional Simulations of the Expanding Supernova Remnant of Sn 1987a.” The Astrophysical Journal 794 (2): 174. http://iopscience.iop.org/0004-637X/794/2/174

Rye, Marie S, Elizabeth SH Scaman, Ruth B Thornton, Shyan Vijayasekaran, Harvey L Coates, Richard W Francis, Craig E Pennell, Jenefer M Blackwell, and Sarra E Jamieson. 2014. “Genetic and Functional Evidence for a Locus Controlling Otitis Media at Chromosome 10q26. 3.” BMC medical genetics 15 (1): 18. http://www.biomedcentral.com/1471-2350/15/18

Tian, Yuan, Barbara Etschmann, Yuan Mei, Pascal V. Grundler, Denis Testemale, Jean-Louis Hazemann, Peter Elliott, Yung Ngothai, and Joël Brugger. 2014. “Speciation and Thermodynamic Properties of Manganese(Ii) Chloride Complexes in Hydrothermal Fluids: In Situ Xas Study.” Geochimica et Cosmochimica Acta 129 (0): 77-95. doi: http://dx.doi.org/10.1016/j.gca.2013.12.003.

Tong, Feifei, Liang Cheng, Ming Zhao, Tongming Zhou, and Xiao-bo Chen. 2014. “The Vortex Shedding around Four Circular Cylinders in an in-Line Square Configuration.” Physics of Fluids (1994-present) 26 (2): -. doi: doi:http://dx.doi.org/10.1063/1.4866593.

Varini, N., Vanossi, A., Guerra, R., Mandelli, D., Capozza R. and Tosatti E. 2014. “Static friction scaling of physisorbed islands: the key is in the edge.” Nanoscale, 2014, Accepted Manuscript. DOI: 10.1039/C4NR06521B http://pubs.rsc.org/en/content/articlelanding/2014/nr/c4nr06521b#!divAbstract

Veth, Peter, Cassandra Philippou, Vicki Richards, Mark Staniforth, Jennifer Rodrigues, Amer Khan, Dudley Creagh, Andrew Viduka, Anthony Barham, and Ian MacLeod. 2013. “The Australian Historic Shipwreck Preservation Project 2012: First Report on the Background, Reburial And’in-Situ’preservation at The’clarence'(1841-50).” AIMA Bulletin 37: 1. http://search.informit.com.au/documentSummary;dn=741371215970476;res=IELHSS

White, Nicole E., Michael Bunce, Peter R. Mawson, Rick Dawson, Denis A. Saunders, and Morten E. Allentoft. 2014. “Identifying Conservation Units after Large-Scale Land Clearing: A Spatio-Temporal Molecular Survey of Endangered White-Tailed Black Cockatoos (Calyptorhynchus Spp.).” Diversity and Distributions: n/a-n/a. doi: 10.1111/ddi.12202. http://onlinelibrary.wiley.com/doi/10.1111/ddi.12202/full

Wood, Tristan L. “Cfd Validation of Hydrofoil Performance Characteristics in Cavitating and Non-Cavitating Flows.” http://cmst.curtin.edu.au/local/docs/pubs/wood_tristan_thesis_report_2013%20Tristan%20Wood.pdf

Wortley, Shaun. “Cfd Analysis of Container Ship Sinkage, Trim and Resistance.” http://cmst.curtin.edu.au/local/docs/pubs/wortley_2013_cfd_Analysis_of_container_ship_sinkage.pdf

Yang, Jindan. 2014. “Turbo Equalization and its Applications.” http://research-repository.uwa.edu.au/files/4307634/Yang_Jindan_2014.pdf

Yuan, Huaiyu, and Vadim Levin. 2014. “Stratified Seismic Anisotropy and the Lithosphere-Asthenosphere Boundary beneath Eastern North America.” Journal of Geophysical Research: Solid Earth: 2013JB010785. doi: 10.1002/2013JB010785. http://onlinelibrary.wiley.com/doi/10.1002/2013JB010785/abstract

Zhang, Junfang, M. B. Clennell, D. N. Dewhurst, and Keyu Liu. 2014. “Combined Monte Carlo and Molecular Dynamics Simulation of Methane Adsorption on Dry and Moist Coal.” Fuel 122 (0): 186-197. doi: http://dx.doi.org/10.1016/j.fuel.2014.01.006.

Zammit, Mark C., Dmitry V. Fursa, and Igor Bray. 2014. “Electron Scattering from the Molecular Hydrogen Ion and Its Isotopologues.” Physical Review A 90 (2): 022711. http://link.aps.org/doi/10.1103/PhysRevA.90.022711.

2013

Abdurakhmanov, I. B., A. S. Kadyrov, D. V. Fursa, and I. Bray. 2013. “Target Structure-Induced Suppression of the Ionization Cross Section for Low-Energy Antiproton-Molecular Hydrogen Collisions: Theoretical Confirmation.” Physical Review Letters 111 (17): 173201.http://link.aps.org/doi/10.1103/PhysRevLett.111.173201.

Addicoat, Matthew A., Syou Fukuoka, Alister J. Page, and Stephan Irle. 2013. “Stochastic Structure Determination for Conformationally Flexible Heterogenous Molecular Clusters: Application to Ionic Liquids.” Journal of Computational Chemistry 34 (30): 2591-2600. doi: 10.1002/jcc.23420. http://onlinelibrary.wiley.com/doi/10.1002/jcc.23420/full

Burgar, Joanna M., Daithi C. Murray, Michael D. Craig, James Haile, Jayne Houston, Vicki Stokes, and Michael Bunce. 2013. “Who’s for Dinner? High-Throughput Sequencing Reveals Bat Dietary Differentiation in a Biodiversity Hotspot Where Prey Taxonomy Is Largely Undescribed.” Molecular Ecology: n/a-n/a. doi: 10.1111/mec.12531. http://onlinelibrary.wiley.com/doi/10.1111/mec.12531/full

Carter, D. J., O. Warschkow, J. D. Gale, G. Scappucci, W. M. Klesse, G. Capellini, A. L. Rohl, M. Y. Simmons, D. R. McKenzie, and N. A. Marks. 2013. “Electronic Structure of Phosphorus and Arsenic Δ-Doped Germanium.” Physical Review B 88 (11): 115203.http://link.aps.org/doi/10.1103/PhysRevB.88.115203.

Chen, Bin, Jun Wang, Qiang Gao, Yujie Chen, Xiaozhou Liao, Chunsheng Lu, Hark Hoe Tan et al. 2013. “Strengthening Brittle Semiconductor Nanowires through Stacking Faults: Insights from in Situ Mechanical Testing.” Nano Letters 13 (9): 4369-4373. doi: 10.1021/nl402180k. http://pubs.acs.org/doi/abs/10.1021/nl402180k

Cisonni, J., A. D. Lucey, A. J. C. King, S. M. S. Islam, and M. S. Goonewardene. 2014. “In-Silico Study of the Nasal Cavity’s Influence on the Pharyngeal Wall Pressure in Anatomically-Correct Airway Models of Patients with Obstructive Sleep Apnea.” In The 15th International Conference on Biomedical Engineering, ed. James Goh, 335-338. Springer International Publishing. http://link.springer.com/chapter/10.1007/978-3-319-02913-9_85

Edwards, Luke. “Catami Classification Scheme for Scoring Marine Biota and Substrata in Underwater Imagery.”

Horner, J., R. A. Wittenmyer, T. C. Hinse, J. P. Marshall, A. J. Mustill, and C. G. Tinney. 2013. “A Detailed Dynamical Investigation of the Proposed Qs Virginis Planetary System.” Monthly Notices of the Royal Astronomical Society 435 (3): 2033-2039. doi: 10.1093/mnras/stt1420. http://mnras.oxfordjournals.org/content/435/3/2033.short

Iversen, Kalon J., and Michelle J. S. Spencer. 2013. “Effect of Zno Nanostructure Morphology on the Sensing of H2s Gas.” The Journal of Physical Chemistry C 117 (49): 26106-26118. doi: 10.1021/jp408916b. http://pubs.acs.org/doi/abs/10.1021/jp408916b

Jindan, Yang, Guo Qinghua, Huang Defeng, and S. Nordholm. 2013. “Exploiting Cyclic Prefix in Turbo Fde Systems Using Factor Graph” Wireless Communications and Networking Conference (WCNC), 2013 IEEE, doi: 10.1109/WCNC.2013.6554960. http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6554960&tag=1

Lovell, J. E. J., J. N. McCallum, P. B. Reid, P. M. McCulloch, B. E. Baynes, J. M. Dickey, S. S. Shabala et al. 2013. “The Auscope Geodetic Vlbi Array.” Journal of Geodesy 87 (6): 527-538. doi: 10.1007/s00190-013-0626-3. http://link.springer.com/article/10.1007/s00190-013-0626-3

Maxville, V. 2013. “Introducing: Computational Science.” In 2013 International Conference on Computational Science, eds V. Alexandrov, M. Lees, V. Krzhizhanovskaya, J. Dongarra and P. M. A. Sloot, 1456-1465. Amsterdam: Elsevier Science Bv. http://www.sciencedirect.com/science/article/pii/S1877050913004560

Morishita, Tetsuya, Michelle J. S. Spencer, Shuhei Kawamoto, and Ian K. Snook. 2013. “A New Surface and Structure for Silicene: Polygonal Silicene Formation on the Al(111) Surface.” The Journal of Physical Chemistry C 117 (42): 22142-22148. doi: 10.1021/jp4080898. http://pubs.acs.org/doi/abs/10.1021/jp4080898

Murray, Dáithí C, James Haile, Joe Dortch, Nicole E White, Dalal Haouchar, Matthew I Bellgard, Richard J Allcock, Gavin J Prideaux, and Michael Bunce. 2013. “Scrapheap Challenge: A Novel Bulk-Bone Metabarcoding Method to Investigate Ancient DNA in Faunal Assemblages.” Scientific reports 3. http://www.nature.com/srep/2013/131128/srep03371/full/srep03371.html

Owen, Benjamin J, Waseem Kamleh, Derek B Leinweber, M Selim Mahbub, and Benjamin J Menadue. 2013. “Probing the Proton and Its Excitations in Full Qcd.” arXiv preprint arXiv:1312.0291. http://arxiv.org/abs/1312.0291

Poger, David, and Alan E. Mark. 2013. “The Relative Effect of Sterols and Hopanoids on Lipid Bilayers: When Comparable Is Not Identical.” The Journal of Physical Chemistry B. doi: 10.1021/jp409748d. http://pubs.acs.org/doi/abs/10.1021/jp409748d

Power, Chris. 2013. “Seeking Observable Imprints of Small-Scale Structure on the Properties of Dark Matter Haloes.” arXiv preprint arXiv:1309.1591. http://arxiv.org/abs/1309.1591

Ren, Diandong, Lance M. Leslie, and Mervyn J. Lynch. 2013. “Trends in Storm-Triggered Landslides over Southern California.” Journal of Applied Meteorology and Climatology. doi: 10.1175/JAMC-D-12-0253.1. http://journals.ametsoc.org/doi/abs/10.1175/JAMC-D-12-0253.1

Roberts, Dale S, Waseem Kamleh, and Derek B Leinweber. 2013. “Nucleon Excited State Wave Functions from Lattice Qcd.” arXiv preprint arXiv:1311.6626. http://arxiv.org/abs/1311.6626

Wang, Yichao, Jian Zhen Ou, Sivacarendran Balendhran, Adam F. Chrimes, Majid Mortazavi, David D. Yao, Matthew R. Field et al. 2013. “Electrochemical Control of Photoluminescence in Two-Dimensional Mos2 Nanoflakes.” ACS Nano 7 (11): 10083-10093. doi: 10.1021/nn4041987. http://pubs.acs.org/doi/abs/10.1021/nn4041987

Wu, C., A. Wicenec, D. Pallot, and A. Checcucci. 2013. “Optimising Ngas for the Mwa Archive.” Experimental Astronomy 36 (3): 679-694. doi: 10.1007/s10686-013-9354-1. http://link.springer.com/article/10.1007/s10686-013-9354-1

Yiapanis, George, Andrew J. Christofferson, Michael Plazzer, Michael P. Weir, Emma L. Prime, Greg G. Qiao, David H. Solomon, and Irene Yarovsky. 2013. “Molecular Mechanism of Stabilization of Thin Films for Improved Water Evaporation Protection.” Langmuir 29 (47): 14451-14459. doi: 10.1021/la402275p. http://pubs.acs.org/doi/abs/10.1021/la402275p

Zhang, F., J. D. Gale, B. P. Uberuaga, C. R. Stanek, and N. A. Marks. 2013. “Importance of Dispersion in Density Functional Calculations of Cesium Chloride and Its Related Halides.” Physical Review B 88 (5): 054112. http://link.aps.org/doi/10.1103/PhysRevB.88.054112.

2009 – March 2013

Abdurakhmanov, I. B., I. Bray, D. V. Fursa, A. S. Kadyrov, and A. T. Stelbovics. 2012. “Fully Differential Cross Section for Single Ionization in Energetic C6+-He Collisions.” Physical Review A 86: 3 pages, http://pra.aps.org/pdf/PRA/v86/i3/e034701.

Abdurakhmanov, I. B., A. S. Kadyrov, I. Bray, and A. T. Stelbovics. 2011a. “Coupled-Channel Intergral-Equatin Approach to Antiproton-Hydrogen Collisions.” Journal of Physics B: Atomic, Molecular and Optical Physics 44, http://iopscience.iop.org/0953-4075/44/7/075204/pdf/0953-4075_44_7_075204.pdf.

———. 2011b. “Differential Ionization in Antiproton-Hydrogen Collisions within the Convergent-Close-Coupling Approach”. Journal of Physics B: Atomic, Molecular and Optical Physics 44: 10 pages, http://iopscience.iop.org/0953-4075/44/16/165203/pdf/0953-4075_44_16_165203.pdf.

Abdurakhmanov, I. B., A. S. Kadyrov, D. V. Fursa, I. Bray, and A. T. Stelbovics. 2011. “Convergent Close-Coupling Calculations of Helium Single Ionization by Antiproton Impact.” Physical Review A 84: 6 pages, http://pra.aps.org/pdf/PRA/v84/i6/e062708.

Al-Towairqi, Yazeed Khaled. 2010. Numeric Modelling of Seismic Wave Propagation in Coal Seams. http://www.geophy.curtin.edu.au/EGPPUBS/Docs/2010-002505-AWA.PDF.

Alam, Muhammad S., and Liang Cheng. 2010. “A Parallel Three-Dimensional Scour Model to Predict Flow and Scour Below a Submarine Pipeline.” Central European Journal of Physics 8 (4): 604-619. doi: http://dx.doi.org/10.2478/s11534-009-0149-y.

Arthur, Daniel T. J., and Masood Mehmood Khan. 2013. “Quantitative Deconvolution of Human Thermal Infrared Emittance.” IEEE Journal of Biomedical and Health Informatics 17 (1): 205-213. doi: http://dx.doi.org/10.1109/TITB.2012.2225108.

Arthur, Daniel T. J., and Masood Mehmood Khan Khan. 2011. “Thermal Infrared Imaging toward Diagnostic Medical Capability.” In 33rd Annual International conference of the IEEE EMBS, Boston, MA, 6146-6149. doi: http://dx.doi.org/10.1109/IEMBS.2011.6091518.

Barnes, Stephen J., Grant A. Osborne, Doug Cook, Lauritz Barnes, Wolfgang D. Maier, and Belinda Godel. 2011. “The Santa Rita Nickel Sulfide Deposit in the Fazenda Mirabela Intrusion, Bahia, Brazil: Geology, Sulfide Geochemistry and Genesis.” Economic Geology 106 (7): 1083-1110. doi: http://dx.doi.org/10.2113/econgeo.106.7.1083

Bartlett, Philip L., and Andris T. Stelbovics. “Ionization of Atoms by Electron Impact.” Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment 619 (1–3): 1-6. doi: http://dx.doi.org/10.1016/j.nima.2009.10.083.

Bartschat, Klaus, Dmitry V. Fursa, and Igor Bray. 2010. “A Detailed Study of Electron Impact Ionization of Ne(2s) and Ar(3s).” Journal of Physics B: Atomic, Molecular and Optical Physics 43: 13 pages, http://iopscience.iop.org/0953-4075/43/12/125202/pdf/0953-4075_43_12_125202.pdf.

Bartschat, Klaus, Anatoli S. Kheifets, Dmitry V. Fursa, and Igor Bray. 2010. “Benchmark Calculations for Electron Impact Ionization and Ionization-Excitation of Magnesium.” Journal of Physics B: Atomic, Molecular and Optical Physics 43: 13 pages, http://iopscience.iop.org/0953-4075/43/16/165205/pdf/0953-4075_43_16_165205.pdf.

Beardsley, A. P., B. J. Hazelton, M. F. Morales, W. Arcus, D. Barnes, G. Bernardi, J. D. Bowman et al. 2013. “The EoR Sensitivity of the Murchison Widefield Array.” Monthly Notices Letters of the Royal Astronomical Society 429 (1): L5-L9. doi: http://dx.doi.org/10.1093/mnrasl/sls013.

Beardsley, A. P., B. J. Hazelton, M. F. Morales, W. Arcus, D. Barnes, G. Bernardi, J. D. Bowman et al. 2012. “The EoR Sensitivity of the Murchison Widefield Array.” http://arxiv.org/abs/1204.3111.

Beardsley, A. P., B. J. Hazelton, M. F. Morales, R. J. Capallo, R. Goeke, D. Emrich, C. J. Lonsdale et al. 2012. “A New Layout Optimization Technique for Interferometric Arrays, Applied to the Murcheson Widefield Array.” Monthly Notices Letters of the Royal Astronomical Society 425: 1781-1788. doi: http://dx.doi.org/10.1111/j.1365-2966.2012.20878.x.

Beardsley, A. P., B. J. Hazelton, M. F. Morales, R. J. Cappallo, R. Goeke, D. Emrich, C. J. Lonsdale et al. 2012. “A New Layout Optimization Technique for Interferometric Allays, Applied to the MWA.” http://arxiv.org/abs/1203.1293.

Bellgard, Matthew I., Andrew Macgregor, Fred Janon, Adam Harvey, Peter O’Leary, Adam Hunter, and Hugh Dawkins. 2012. “A Modular Approach to Disease Registry Design Successful Adoption of an Internet-Based Rare Disease Registry.” Human Mutation 33: E2356-E2366, http://onlinelibrary.wiley.com/doi/10.1002/humu.22154/pdf.

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Bostock, Christopher J., Dmitry V. Fursa, and Igor Bray. 2010. “Relativistic Convergent Close-Coupling Method Applied to Electron Scattering from Mercury.” Physical Review A 82: 13 pages, http://pra.aps.org/pdf/PRA/v82/i2/e022713.

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Bray, Igor, and Dmitry V. Fursa. 2011. “Benchmark Cross Sections for Electron-Impact Total Single Ionization of Helium.” Journal of Physics B: Atomic, Molecular and Optical Physics 44: 3 pages, http://iopscience.iop.org/0953-4075/44/6/061001/pdf/0953-4075_44_6_061001.pdf.

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Carter, Damien J., Andrew L. Rohl, Alexander Shtukenberg, Shudan Bian, Chunhua Hu, Lisa Baylon, Bart Kahr et al. 2012. “Prediction of Soai Reaction Enantioselectivity Induced by Crystals of N-(2-Thienylcarbonyl)Glycine.” Crystal Growth and Design 12: 2138-2145. doi: http://dx.doi.org/10.1021/cg300207d.

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Chadwick, Tristan, Tele Tan, Geoff West, David A. McMeekin, Eun-Jung Holden, Mike Dentith, and T. Campbell McCuaig. 2010. “Quantitative Study of Geological Target Spotting with the Use of Eye Tracking.” In International IUI 2010 Workshop on Eye Gaze in Intelligent Human Machine Interaction. http://davidmcmeekin.net/wp-content/uploads/2010/09/chadwick_target_spotting_eye_tracking.pdf.

Chaichana, Thanapong, Zhonghua Sun, and James Jewkes. 2010. “Haemodynamic Effect of Coronary Angulations on Subsequent Development of Coronary Artery Disease: A Preliminary Study.” In 2010 Sixth IEEE International Conference on e-Science Workshops. http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=5693139.

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Deplazes, Evelyne, Martti Louhivouri, Dylan Jayatilaka, Siewert J. Marrink, and Ben Corry. 2012. “Structural Investigation of MSCl Gating Using Experimental Data and Course Grained MD Simulations.” PLoS Computational Biology 8 (9), http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002683.

Devine, Bryce, Inkook Jang, Travis Kemper, Donghwa Lee, Julian D. Gale, Nedialka Iordanova, and Susan B. Sinnott. 2010. “Multilevel Computational Analysis of Fluorocarbon Polyatomic Deposition on Diamond.” Journal of Physical Chemistry C 114: 12535-12544. doi: http://dx.doi.org/10.1021/jp100667n.

Edwards, David, Stephen Wilcox, Roberto A. Barrero, Delphine Fleury, Colin R. Cavanagh, Kerrie L. Forrest, Matthew J. Hayden et al. 2012. “Bread Matters: A National Initiative to Profile the Genetic Diversity of Australian Wheat.” Plant Biotechnology Journal 10 (6): 703-708. doi: http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x.

Eiserbeck, Christiane, Robert K. Nelson, Kliti Grice, Joseph Curiale, Christopher M. Reddy, and Paolo Raiteri. 2011. “Separation of 18a(H)-, 18b(H)-Oleanane and Lupane by Comprehensive Two-Dimensional Gas Chromatography.” Journal of Chromatography A 1218: 5549-5553. doi: http://dx.doi.org/10.1016/j.chroma.2011.06.021.

Ellwood, Simon R., Zhaohui Liu, Rob A. Syme, Zhibing Lai, James Hane, K., Felicity Keiper, Caroline S. Moffat, Richard P. Oliver, and Timothy L. Friesen. 2010. “A First Genome Assembly of the Barley Fungal Pathogen Pyrenophora Teres F. Teres.” Genome Biology 11: 14 pages, http://www.biomedcentral.com/content/pdf/gb-2010-11-11-r109.pdf.

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Evans, Bradley, Tom J. Lyons, Paul A. Barber, Christine Stone, and Giles Hardy. 2012. “Dieback Classification Modelling Using High-Resolution Digital Multispectral Imagery and in Situ Assessments of Crown Condition.” Remote sensing Letters 3 (6): 541-550. doi: http://dx.doi.org/10.1080/01431161.2011.639400.

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Featherstone, W. E., J. F. Kirby, C. Hirt, M. S. Filmer, S. J. Claessens, N. J. Brown, G. Hu, and G. M. Johnston. 2011. “The AUSGeoid09 Model of Australian Height Datum.” Journal of Geodesy 85 (3): 133-150. doi: http://dx.doi.org/10.1007/s00190-010-0422-2.

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Feng, Yuqing, Xavier Choi, Bailin Wu, and Chong Wong. 2012. “Evaluation of Sand Screen Performance Using a Discrete Element Model.” In SPE Asia Pacific Oil and Gas Conference and Exhibition, Perth, Australia. doi: http://dx.doi.org/10.2118/158671-MS.

Fenter, Paul, Sebastien Kerisit, Paolo Raiteri, and Julian D. Gale. 2013. “Is the Calcite-Water Interface Understood? Direct Comparisons of Molecular Dynamics Simulations with Specular X-Ray Reflectivity Data.” Journal of Physical Chemistry C [In press]. doi: http://dx.doi.org/10.1021/jp310943s .

Fitzpatrick, Andrew, Tim Munday, Kevin Cahill, and Volmer Berens. 2010. “Redefining the Groundwater Resource of the Eyre Peninsula, South Australia, Using AEM Data.” In Symposium on the Application of Geophysics to Engineering and Environmental Problems 2010, 287-293. doi: http://dx.doi.org/10.4133/1.3445445.

Furmaniak, Sylwester, Piotr Kowalczyk, Artur P. Terzyk, Piotr A. Gauden, and Peter J. F. Harris. “Synergetic Effect of Carbon Nanopore Size and Surface Oxidation on CO2 Capture from CO2/CH4 Mixtures.” Journal of Colloid and Interface Science (0). doi: http://dx.doi.org/10.1016/j.jcis.2013.01.044.

Furmaniak, Sylwester, Artur P. Terzyk, Katsumi Kaneko, Piotr A. Gauden, Piotr Kowlaczyk, and Tsutomu Itoh. 2013. “The First Atomistic Modelling-Aided Reproduction of Morphologically Defective Single Walled Carbon Nanohorns.” Physical Chemistry Chemical Physics 15: 1232-1240. doi: http://dx.doi.org/10.1039/C2CP43371K.

Gale, Julian D., Paolo Raiteri, and Adri C. T. van Duin. 2011. “A Reactive Force Field for Aqueous-Calcium Carbonate Systems.” Physical Chemistry Chemical Physics 13: 16666-16679. doi: http://dx.doi.org/10.1039/C1CP21034C

Gale, Julian D., Kate Wright, and Karen A. Hudson-Edwards. 2010. “A First-Principles Determination of the Orientation of H3O+ in Hydonium Alunite.” American Mineralogist 95 (7): 1109-1112. doi: http://dx.doi.org/10.2138/am.2010.3537

Gandhi, Neha S., Craig Freeman, Christopher R. Parish, and Ricardo L. Mancera. 2012. “Computational Analyses of the Catalytic and Heparin-Binding Sites and Their Interactions with Glycosaminoglycans in Glycoside Hydrolase Family 79 Endo-[Beta]-Glucuronidase (Heparanase).” Glycobiology 22 (1): 35-55. doi:http://dx.doi.org/ 10.1093/glycob/cwr095.

Gandhi, Neha S., and Ricardo L. Mancera. 2010. “Can Current Force Fields Reproduce Ring Puckering in 2-O-Sulfo-Α-L-Iduronic Acid? A Molecular Dynamics Simulation Study.” Carbohydrate Research 345 (5): 689-695. doi: http://dx.doi.org/10.1016/j.carres.2009.12.020.

Godel, Belinda, Stephen J. Barnes, Sarah-Jane Barnes, and Wolfgang D. Maier. 2010. “Platinum Ore in Three Dimensions: Insights from High-Resolution X-Ray Computed Tomography.” Geology Today 38 (1): 1127-1130. doi: http://dx.doi.org/10.1130/G31265.1.

Godel, Belinda, Stephen J. Barnes, Derya Gurer, Peter Austin, and Marco L. Fiorentini. 2013. “Chrimite in Komatiites 3d Morphologies with Implications for Crystallization Mechanisms.” Contributions to mineralogy and Petrology 165 (1): 173-189. doi: http://dx.doi.org/10.1007/s00410-012-0804-y.

Gu, Qinfen, Liang Gao, Yanhui Guo, Yingbin Tan, Ziwei Tang, Kia S. Wallwork, Feiwu Zhang, and Xuebin Yu. 2012. “Structure and Decomposition of Zinc Borohydride Ammonia Adduct: Towards a Pure Hydrogen Release.” Energy Environmental Science 5: 7590-7600. doi: http://dx.doi.org/10.1039/C2EE02485C.

Hane, James. 2011. “Bioinformatic Genome Analysis of the Necrotrophic Wheat-Pathogenic Fungus Phaeosphaeria Nodorum and Related Dothideomycete Fungi.” Murdoch University, Fremantle, Australia. http://researchrepository.murdoch.edu.au/5803/.

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Hein, J. D., S. Kidwai, P. W. Zetner, C. Bostock, D. V. Fursa, I. Bray, L. Sharma, R. Srivastava, and A. Stauffer. 2011a. “Differential Cross Sections for Electron-Impact Excitataion of Laser-Excited 174yb(…6s6p3p1).” Journal of Physics B: Atomic, Molecular and Optical Physics 44: 9 pages, http://iopscience.iop.org/0953-4075/44/1/015202/pdf/0953-4075_44_1_015202.pdf.

———. 2011b. “Electron-Impact Coherence Parameters for Electgron-Impact Excitation of Laser-Excited 174yb(…6s6p3p1).” Journal of Physics B: Atomic, Molecular and Optical Physics 44: 7 pages, http://iopscience.iop.org/0953-4075/44/7/075201/pdf/0953-4075_44_7_075201.pdf.

Hirt, C. 2011. “Mean Kernels to Improve Gravimetric Geoid Determination Based on Modified Stoke’s Integration.” Computers & Geosciences. doi: http://dx.doi.org/10.1016/j.cageo.2011.01.005.

Hirt, C., W. E. Featherstone, and S. J. Claessens. 2011. “On the Accurate Numerical Evaluation of Geodetic Convolutin Integrals.” Journal of Geodesy 85 (8): 519-538. doi: http://dx.doi.org/10.1007/s00190-011-0451-5.

Holden, Eun-Jung, Michael Dentith, T. Campbell McCuaig, Tristan Chadwick, Tele Tan, and Geoff West. 2010. “Profiling of Aeromagnetic Data Interpretation Using the Eye Tracker.” ASEG Extended Abstracts: 1-4, http://dx.doi.org/10.1071/ASEG2010ab142

Hoshino, M., H. Kato, d. Suzuki, H. Tanaka, I. Bray, D. V. Fursa, S. J. Buckman, O. Ingolfsson, and M. J. Brunger. 2010. “Benchmark Integral Cross Sections for Electron Impact Excitation of the N=2 States in Helium.” Plasma Science and Technology 12 (3): 348-352. doi: http://dx.doi.org/10.1088/1009-0630/12/3/20.

Hudson-Edwards, Karen A., and Kate Wright. 2011. “Computer Simulations of the Interactions of the (0 1 2) and (0 0 1) Surfaces of Jarosite with Al, Cd, Cu2+ and Zn.” Geochimica et Cosmochimica Acta 75 (1): 52-62. doi: http://dx.doi.org/10.1016/j.gca.2010.10.004.

Hughes, Zak E., and Julian D. Gale. 2010. “A Computational Investigation of the Properties of a Reverse Osmosis Membrane.” Journal of Materials Chemistry 20: 7788-7799. doi: http://dx.doi.org/10.1039/C0JM01545H.

———. 2012. “Molecular Dynamics Simulations of the Interactions of Potential Foulant Molecules and a Reverse Osmosis Membrane.” Journal of Materials Chemistry 22: 175-184. doi: http://dx.doi.org/10.1039/C1JM13230J.

Hughes, Zak E., and Ricardo L. Mancera. 2013. “Molecular Dynamics Simulations of Mixed DOPC-[Beta]-Sitosterol Bilayers and Their Interaction with DMSO.” Soft Matter 9: 2920-2935. doi: http://dx.doi.org/10.1039/C3SM27805K

Hughes, Zak E., Alan E. Mark, and Ricardo L. Mancera. 2012. “Molecular Dynbamics Simulations of the Interactions of DMSO with DPPC and DOPC Phospholipid Membranes.” Journal of Physical Chemistry B 116: 11911-119*23. doi: http://dx.doi.org/10.1021/jp3035538.

Hughes, Zak E., Cameron J. Shearer, Joe Shapter, and Julian D. Gale. 2012. “Simulation of Water Transport through Functionalized Single-Walled Carbon Nanotubes (SWCNTs).” Journal of Physical Chemistry C 116: 24943-24953. doi: http://dx.doi.org/10.1021/jp307679h.

Hunter, Adam, Andrew B. Macgregor, Tamas O. Szabo, Crispin A. Wellington, and Matthew I. Bellgard. 2012. “Yabi: An Online Research Environment for Grid, High Performance and Cloud Computing.” Source Code for Biology and Medicine 7 (1): 32 pages. doi: http://dx.doi.org/10.1186/1751-0473-7-1.

Jewkes, J. W., A. King, and Y. M. Chung. 2011. “Large Eddy Simulation of a Steady Circular Jet Issuing into Quiescent Fluid.” 19th International Congress on Modelling and Simulation, Perth, Australia: http://www.mssanz.org.au/modsim2011/A7/jewkes.pdf.

Kala, J., B. B. Evans, T. J. Lyons, and I. J. Foster. 2011. “Dynamic Downscaling for the Southwest of Western Australia Using the Wrf Modelling System.” In 19th International Congress on Modelling and Simulation, Perth, Australia, 2740-. http://www.mssanz.org.au/modsim2011/F5/kala.pdf.

Kala, J., T. J. Lyons, D. J. Abbs, and U. S. Nair. 2010. “Numerical Simulations of the Impacts of Land-Cover Change on a Southern Sea Breeze in South-West Western Australia.” Boundary-Layer Meteorology 135: 485-503. doi: http://dx.doi.org/10.1007/s10546-010-9486-z.

Kala, Jatin. 2011. “Land-Atmosphere Interactions in Southwestern Western Australia.” Murdoch University, Fremantle, Australia. http://researchrepository.murdoch.edu.au/id/eprint/10624

Kala, Jatin, Tom J. Lyons, Udaysankar S. Nair, and Yulin Wu. 2012. “Large-Eddy Simulations of Surface Influences on Planetary Boundary Layer Development in Southwest Western Australia.” Quarterly Journal of the Royal Meterological Society B 138 (667): 1465-1475. doi: http://dx.doi.org/10.1002/qj.1879.

Karamertzanis, Panagiotis G., Paolo Raiteri, and Amparo Galindo. 2010. “The Use of Anisotropic Potentials in Modeling Water and Free Energies of Hydration.” Journal of Chemical Theory and Computation 6: 1590-1607. doi: http://dx.doi.org/10.1021/ct900693q.

Katz, Matthew Lubelski, and Jingbo Wang. 2010. “Cluster State Computation with Quantum-Dot Charge Qubits.” Advances in Mathematical Physics 2010: 21 pages, http://www.hindawi.com/journals/amp/2010/482598/.

Kheifets, A. S., I. Bray, J. Colgan, and M. S. Pindzola. 2011.” Interference Effects in L-Shell Atomic Double Photoionization.” Journal of Physics B: Atomic, Molecular and Optical Physics 44: 6 pages, http://iopscience.iop.org/0953-4075/44/1/011002/pdf/0953-4075_44_1_011002.pdf.

Kheifets, A. S., D. V. Fursa, I. Bray, J. Colgan, and M. S. Pindzola. 2010. “Differential Cross Sections of Double Photoionization of Lithium.” Physical Review A 82: 10 pages, http://pra.aps.org/pdf/PRA/v82/i2/e023403.

Kheifets, A. S., D. V. Fursa, C. W. Hines, I. Bray, J. Colgan, and M. S. Pindzola. 2010. Spin Effects in Double Photoionization of Lithium. Physical Review A 81: 6 pages, http://pra.aps.org/pdf/PRA/v81/i2/e023418.

Klonowski, Wojciech, Mervyn Lynch, Peter Fearns, Leon Majewski, and Mark Gray. 2011. Ningaloo Collaboration Cluster: Hyperspectral Mappying of Bathymetry and Benthic Cover. Bentley, Australia: The Cluster. http://ningaloo-atlas.org.au/sites/default/files/Hyperspectral%20mapping%20of%20bathymetry%20and%20benthic%20cover.pdf.

Konovalov, Dmitry A., Dmitry V. Fursa, and Igor Bray. 2012.” J-Matrix Calculation of Electron-Helium S-Wave Scattering. II. Single Ionization and Single Excitation.” Physical Review A 86: 7 pages, http://pra.aps.org/pdf/PRA/v86/i5/e052704.

Kowalczyk, Piotr. 2012. “Molecular Insight into the High Selectivity of Double-Walled Carbon Nanotubes.” Physical Chemistry Chemical Physics 14: 2784-2790. doi: http://dx.doi.org/10.1039/c2cp23445a.

Kowalczyk, Piotr, Sylwester Furmaniak, Piotr A. Gauden, and Artur P. Terzyk. 2012. “Methane-Induced Deformation of Porous Carbons: From Normal to High-Pressure Operating Conditions.” Journal of Physical Chemistry C 116: 1740-1747. doi: http://dx.doi.org/ 10.1021/jp209364x.

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